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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11779410 chr8:2872533 A/T INTS9 chr8:28625178-28747759:- -0.69 -6.36 5.86E-10 Box Plot
BLCA rs11779410 chr8:2872533 A/T TNKS chr8:9413424-9639856:+ -0.63 -7.44 6.59E-13 Box Plot
BLCA rs11780017 chr8:14881701 C/T AGPAT5 chr8:6565878-6617187:+ 0.65 6.74 5.84E-11 Box Plot
BLCA rs11780017 chr8:14881701 C/T CHMP7 chr8:23101150-23119513:+ 0.7 7.38 1.01E-12 Box Plot
BLCA rs11780017 chr8:14881701 C/T CNOT7 chr8:17082473-17104387:- 0.73 7.5 4.41E-13 Box Plot
BLCA rs11780017 chr8:14881701 C/T ENTPD4 chr8:23243296-23315208:- 0.58 6.96 1.52E-11 Box Plot
BLCA rs11780017 chr8:14881701 C/T ERI1 chr8:8859657-8974256:+ 0.67 6.4 4.63E-10 Box Plot
BLCA rs11780017 chr8:14881701 C/T FAM160B2 chr8:21946670-21962409:+ 0.52 5.98 5.23E-9 Box Plot
BLCA rs11780017 chr8:14881701 C/T FBXO25 chr8:356428-427967:+ 0.62 5.99 4.75E-9 Box Plot
BLCA rs11780017 chr8:14881701 C/T INTS10 chr8:19674651-19709594:+ 0.65 6.73 6.21E-11 Box Plot
BLCA rs11780017 chr8:14881701 C/T INTS9 chr8:28625178-28747759:- 0.75 7.28 1.9E-12 Box Plot
BLCA rs11780017 chr8:14881701 C/T KIAA1967 chr8:22462257-22477981:+ 0.7 6.95 1.58E-11 Box Plot
BLCA rs11780017 chr8:14881701 C/T LEPROTL1 chr8:29952914-30034724:+ 0.68 6.49 2.64E-10 Box Plot
BLCA rs11780017 chr8:14881701 C/T MCPH1 chr8:6264113-6506025:+ 0.67 6.56 1.76E-10 Box Plot
BLCA rs11780017 chr8:14881701 C/T PCM1 chr8:17780349-17887453:+ 0.62 6.75 5.33E-11 Box Plot